Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC055876.3-201ENST00000431496 288 ntBASIC13.85□□□□□ -0.19
CDH20Q9HBT6 AC241585.1-201ENST00000433527 519 ntBASIC13.85□□□□□ -0.19
CDH20Q9HBT6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 AL450472.2-201ENST00000603663 1156 ntBASIC13.85□□□□□ -0.19
CDH20Q9HBT6 AC138649.4-201ENST00000612222 287 ntBASIC13.85□□□□□ -0.19
CDH20Q9HBT6 TEX28P1-201ENST00000613479 1221 ntBASIC13.85□□□□□ -0.19
CDH20Q9HBT6 TEX28P2-201ENST00000617764 1221 ntBASIC13.85□□□□□ -0.19
CDH20Q9HBT6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH20Q9HBT6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 PHKG1P2-201ENST00000457537 863 ntBASIC13.84□□□□□ -0.19
CDH20Q9HBT6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH20Q9HBT6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CDH20Q9HBT6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH20Q9HBT6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH20Q9HBT6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CDH20Q9HBT6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.83□□□□□ -0.19
CDH20Q9HBT6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH20Q9HBT6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH20Q9HBT6 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.83□□□□□ -0.19
CDH20Q9HBT6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC112504.1-201ENST00000623415 1841 ntBASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC100757.3-201ENST00000622361 1406 ntBASIC13.83□□□□□ -0.2
CDH20Q9HBT6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms