Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 U91328.1-201ENST00000437528 223 ntBASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 GPR53P-205ENST00000457298 1084 ntBASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AC023310.3-201ENST00000557027 670 ntBASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AC100756.1-201ENST00000562736 682 ntBASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AC138749.3-201ENST00000567691 622 ntBASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AC116165.1-201ENST00000611806 668 ntBASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0A4Q9HBG4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 AC132872.4-202ENST00000622924 2756 ntBASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 AC105917.1-201ENST00000506637 2539 ntBASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 AL512384.1-201ENST00000406683 331 ntBASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 ARSEP1-201ENST00000420443 635 ntBASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 KRT18P64-201ENST00000434946 1219 ntBASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 MIR4313-201ENST00000580760 101 ntBASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 IGHV3-72-202ENST00000621503 303 ntBASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A4Q9HBG4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP6V0A4Q9HBG4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP6V0A4Q9HBG4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP6V0A4Q9HBG4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP6V0A4Q9HBG4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 WASH4P-201ENST00000564273 1246 ntBASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 MIR6752-201ENST00000618442 71 ntBASIC17.51■□□□□ 0.39
ATP6V0A4Q9HBG4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms