Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 DBET-201ENST00000630918 3363 ntBASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 AC136604.1-201ENST00000418535 575 ntBASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 AC234783.1-201ENST00000441761 496 ntBASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 AL450472.2-201ENST00000603663 1156 ntBASIC19.05■□□□□ 0.64
RPAP1Q9BWH6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 USP32P1-208ENST00000506594 1164 ntBASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 TIMM17BP1-201ENST00000545713 516 ntBASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 AC018892.3-201ENST00000623986 2499 ntBASIC19.04■□□□□ 0.64
RPAP1Q9BWH6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 AC023824.1-201ENST00000562945 2975 ntBASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 CLK3P2-201ENST00000427566 1453 ntBASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 BOLA2P3-201ENST00000404566 256 ntBASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 AC092552.1-201ENST00000547243 906 ntBASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 HNRNPUP1-201ENST00000554987 333 ntBASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 AC092850.2-201ENST00000623821 2697 ntBASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.03■□□□□ 0.64
RPAP1Q9BWH6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms