Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AC105917.1-201ENST00000506637 2539 ntBASIC18.31■□□□□ 0.52
SLF1Q9BQI6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLF1Q9BQI6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 MIR648-201ENST00000385046 94 ntBASIC18.3■□□□□ 0.52
SLF1Q9BQI6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.3■□□□□ 0.52
SLF1Q9BQI6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 AC015936.2-201ENST00000593177 259 ntBASIC18.3■□□□□ 0.52
SLF1Q9BQI6 BRI3BPP1-201ENST00000594224 787 ntBASIC18.3■□□□□ 0.52
SLF1Q9BQI6 AC097359.3-201ENST00000603982 1210 ntBASIC18.3■□□□□ 0.52
SLF1Q9BQI6 MIR6805-201ENST00000615055 62 ntBASIC18.3■□□□□ 0.52
SLF1Q9BQI6 RPSAP52-203ENST00000622976 1023 ntBASIC18.3■□□□□ 0.52
SLF1Q9BQI6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.3■□□□□ 0.52
SLF1Q9BQI6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AL365203.3-201ENST00000609742 2057 ntBASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 MIR1909-201ENST00000411312 80 ntBASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AC133539.2-201ENST00000604757 467 ntBASIC18.29■□□□□ 0.52
SLF1Q9BQI6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLF1Q9BQI6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.28■□□□□ 0.52
SLF1Q9BQI6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms