Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK1Q99986 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK1Q99986 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK1Q99986 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK1Q99986 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.03□□□□□ -0.16
VRK1Q99986 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK1Q99986 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 PCDHA3-202ENST00000532566 4594 ntBASIC14.03□□□□□ -0.16
VRK1Q99986 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK1Q99986 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 AL596087.1-201ENST00000400979 1969 ntBASIC14.03□□□□□ -0.16
VRK1Q99986 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK1Q99986 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK1Q99986 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.02□□□□□ -0.16
VRK1Q99986 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VRK1Q99986 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.02□□□□□ -0.16
VRK1Q99986 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VRK1Q99986 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VRK1Q99986 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
VRK1Q99986 AC073439.1-201ENST00000624121 1774 ntBASIC14.02□□□□□ -0.16
VRK1Q99986 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.02□□□□□ -0.16
VRK1Q99986 AP3S2-216ENST00000617003 1561 ntBASIC14.02□□□□□ -0.16
VRK1Q99986 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.02□□□□□ -0.16
VRK1Q99986 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
VRK1Q99986 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VRK1Q99986 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VRK1Q99986 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.02□□□□□ -0.17
VRK1Q99986 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.02□□□□□ -0.17
VRK1Q99986 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.02□□□□□ -0.17
VRK1Q99986 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK1Q99986 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.02□□□□□ -0.17
VRK1Q99986 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.02□□□□□ -0.17
VRK1Q99986 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.02□□□□□ -0.17
VRK1Q99986 RARRES2P9-201ENST00000565168 469 ntBASIC14.02□□□□□ -0.17
VRK1Q99986 AC018529.1-201ENST00000613063 361 ntBASIC14.02□□□□□ -0.17
VRK1Q99986 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
VRK1Q99986 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.02□□□□□ -0.17
VRK1Q99986 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK1Q99986 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK1Q99986 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VRK1Q99986 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK1Q99986 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK1Q99986 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms