Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL353726.2-201ENST00000623259 884 ntBASIC16.17■□□□□ 0.18
CDCA3Q99618 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.17■□□□□ 0.18
CDCA3Q99618 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDCA3Q99618 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.17■□□□□ 0.18
CDCA3Q99618 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.17■□□□□ 0.18
CDCA3Q99618 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDCA3Q99618 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDCA3Q99618 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDCA3Q99618 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 AL354877.1-201ENST00000424412 413 ntBASIC16.16■□□□□ 0.18
CDCA3Q99618 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 FTLP1-201ENST00000449155 526 ntBASIC16.16■□□□□ 0.18
CDCA3Q99618 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.16■□□□□ 0.18
CDCA3Q99618 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.16■□□□□ 0.18
CDCA3Q99618 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDCA3Q99618 SPCS2P2-201ENST00000603270 608 ntBASIC16.16■□□□□ 0.18
CDCA3Q99618 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDCA3Q99618 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDCA3Q99618 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.16■□□□□ 0.18
CDCA3Q99618 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDCA3Q99618 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.16■□□□□ 0.18
CDCA3Q99618 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDCA3Q99618 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 AC106886.4-201ENST00000623557 2502 ntBASIC16.15■□□□□ 0.18
CDCA3Q99618 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 AC011742.3-201ENST00000439053 820 ntBASIC16.15■□□□□ 0.18
CDCA3Q99618 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.15■□□□□ 0.18
CDCA3Q99618 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 RN7SL11P-201ENST00000471305 293 ntBASIC16.15■□□□□ 0.18
CDCA3Q99618 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.15■□□□□ 0.18
CDCA3Q99618 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.15■□□□□ 0.18
CDCA3Q99618 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.15■□□□□ 0.18
CDCA3Q99618 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.15■□□□□ 0.18
CDCA3Q99618 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.15■□□□□ 0.18
CDCA3Q99618 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.15■□□□□ 0.18
CDCA3Q99618 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.15■□□□□ 0.18
CDCA3Q99618 AC007787.1-201ENST00000588095 1583 ntBASIC16.15■□□□□ 0.18
CDCA3Q99618 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.15■□□□□ 0.18
CDCA3Q99618 OR10B1P-201ENST00000601666 907 ntBASIC16.15■□□□□ 0.18
CDCA3Q99618 AC073413.1-201ENST00000603927 732 ntBASIC16.15■□□□□ 0.18
CDCA3Q99618 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.15■□□□□ 0.18
CDCA3Q99618 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
CDCA3Q99618 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms