Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 NDUFV2P1-201ENST00000596415 907 ntBASIC19■□□□□ 0.63
CRAMP1Q96RY5 AC016629.1-201ENST00000596579 586 ntBASIC19■□□□□ 0.63
CRAMP1Q96RY5 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 AC022188.1-201ENST00000620960 1664 ntBASIC19■□□□□ 0.63
CRAMP1Q96RY5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 AL596087.1-201ENST00000400979 1969 ntBASIC19■□□□□ 0.63
CRAMP1Q96RY5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 OR6D1P-202ENST00000641007 5290 ntBASIC19■□□□□ 0.63
CRAMP1Q96RY5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19■□□□□ 0.63
CRAMP1Q96RY5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19■□□□□ 0.63
CRAMP1Q96RY5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 EIF4HP1-201ENST00000453115 687 ntBASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 UPF3AP2-201ENST00000457924 1132 ntBASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 AC138627.1-207ENST00000641560 1006 ntBASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CRAMP1Q96RY5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 POM121L8P-201ENST00000417732 1281 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 AC016700.1-201ENST00000429424 312 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 EIF3FP3-201ENST00000434851 1086 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 POM121L9P-203ENST00000441984 1285 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 CHMP4BP1-201ENST00000556017 588 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 RN7SL713P-201ENST00000582127 302 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 AC007663.3-201ENST00000609632 465 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 AL158070.2-201ENST00000623713 1621 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 MTHFR-217ENST00000641820 1569 ntBASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRAMP1Q96RY5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.97■□□□□ 0.63
CRAMP1Q96RY5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms