Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 BTBD6P1-201ENST00000412176 1267 ntBASIC16.62■□□□□ 0.25
CASD1Q96PB1 NUS1P3-201ENST00000423502 862 ntBASIC16.62■□□□□ 0.25
CASD1Q96PB1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 HOMER2P2-201ENST00000451621 847 ntBASIC16.62■□□□□ 0.25
CASD1Q96PB1 AC104306.2-201ENST00000451877 341 ntBASIC16.62■□□□□ 0.25
CASD1Q96PB1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 ECM1P1-201ENST00000604092 1279 ntBASIC16.62■□□□□ 0.25
CASD1Q96PB1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASD1Q96PB1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASD1Q96PB1 AC026471.1-201ENST00000564629 3026 ntBASIC16.62■□□□□ 0.25
CASD1Q96PB1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASD1Q96PB1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASD1Q96PB1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASD1Q96PB1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASD1Q96PB1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASD1Q96PB1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 AC007969.1-201ENST00000433675 447 ntBASIC16.61■□□□□ 0.25
CASD1Q96PB1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 AL022328.3-201ENST00000607943 679 ntBASIC16.61■□□□□ 0.25
CASD1Q96PB1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASD1Q96PB1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASD1Q96PB1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CASD1Q96PB1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.61■□□□□ 0.25
CASD1Q96PB1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 RN7SL48P-201ENST00000579283 293 ntBASIC16.6■□□□□ 0.25
CASD1Q96PB1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 AC112504.1-201ENST00000623415 1841 ntBASIC16.6■□□□□ 0.25
CASD1Q96PB1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CASD1Q96PB1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASD1Q96PB1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.59■□□□□ 0.25
CASD1Q96PB1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASD1Q96PB1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms