Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AC084121.3-201ENST00000641716 218 ntBASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 AC105233.6-201ENST00000642093 218 ntBASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 AC018892.3-201ENST00000623986 2499 ntBASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2E2Q96LR5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 AC098614.1-201ENST00000368528 745 ntBASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 AC004790.1-201ENST00000612686 536 ntBASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2E2Q96LR5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 AC024909.3-201ENST00000611513 2257 ntBASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.21□□□□□ -0.46
UBE2E2Q96LR5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 AL158212.4-201ENST00000624062 1286 ntBASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2E2Q96LR5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms