Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 AC023157.3-201ENST00000619086 2088 ntBASIC13.79□□□□□ -0.2
CPNE2Q96FN4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE2Q96FN4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 TPM4P1-201ENST00000436100 807 ntBASIC13.78□□□□□ -0.2
CPNE2Q96FN4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 AC074386.1-202ENST00000463561 864 ntBASIC13.78□□□□□ -0.2
CPNE2Q96FN4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 PDPK2P-202ENST00000562415 1191 ntBASIC13.78□□□□□ -0.2
CPNE2Q96FN4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 RARRES2P8-201ENST00000566335 367 ntBASIC13.78□□□□□ -0.2
CPNE2Q96FN4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 AC073389.1-201ENST00000595595 795 ntBASIC13.78□□□□□ -0.2
CPNE2Q96FN4 AC104692.2-201ENST00000603054 253 ntBASIC13.78□□□□□ -0.2
CPNE2Q96FN4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 SSR4P1-203ENST00000599569 2260 ntBASIC13.78□□□□□ -0.2
CPNE2Q96FN4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.78□□□□□ -0.2
CPNE2Q96FN4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms