Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRAMD1AQ96CP6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 AC107890.1-201ENST00000422478 521 ntBASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 AC140878.1-201ENST00000565277 250 ntBASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 AL390955.2-201ENST00000603032 514 ntBASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 AC020765.3-201ENST00000613051 740 ntBASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRAMD1AQ96CP6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 AC106881.1-201ENST00000605849 3329 ntBASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GRAMD1AQ96CP6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 SNX18-202ENST00000343017 3140 ntBASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.24■□□□□ 0.19
GRAMD1AQ96CP6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms