Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 AC021097.1-201ENST00000607902 574 ntBASIC14.05□□□□□ -0.16
RFT1Q96AA3 AL773604.1-201ENST00000617417 272 ntBASIC14.05□□□□□ -0.16
RFT1Q96AA3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 AC090616.6-203ENST00000579186 1945 ntBASIC14.05□□□□□ -0.16
RFT1Q96AA3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.05□□□□□ -0.16
RFT1Q96AA3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFT1Q96AA3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.04□□□□□ -0.16
RFT1Q96AA3 AL031284.1-201ENST00000419297 478 ntBASIC14.04□□□□□ -0.16
RFT1Q96AA3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.04□□□□□ -0.16
RFT1Q96AA3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 MROH4P-201ENST00000431302 1578 ntBASIC14.04□□□□□ -0.16
RFT1Q96AA3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFT1Q96AA3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 AGAP7P-201ENST00000582299 2062 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 AGAP14-201ENST00000624701 2060 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms