Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RPGRQ92834 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.24■□□□□ 0.67
RPGRQ92834 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 ACTBP8-201ENST00000403258 1108 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 KLF2P2-201ENST00000416807 1039 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.24■□□□□ 0.67
RPGRQ92834 RPSAP36-202ENST00000494591 1261 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.24■□□□□ 0.67
RPGRQ92834 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.24■□□□□ 0.67
RPGRQ92834 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 AP006547.1-201ENST00000563435 692 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.24■□□□□ 0.67
RPGRQ92834 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.24■□□□□ 0.67
RPGRQ92834 MIR4313-201ENST00000580760 101 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.24■□□□□ 0.67
RPGRQ92834 ECM1P1-201ENST00000604092 1279 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.24■□□□□ 0.67
RPGRQ92834 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.24■□□□□ 0.67
RPGRQ92834 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.24■□□□□ 0.67
RPGRQ92834 AC022211.2-201ENST00000585075 2527 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 AL354989.2-201ENST00000435838 1540 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 AC015818.8-201ENST00000587907 1519 ntBASIC19.24■□□□□ 0.67
RPGRQ92834 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RPGRQ92834 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 CD8B2-202ENST00000417670 633 ntBASIC19.23■□□□□ 0.67
RPGRQ92834 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.23■□□□□ 0.67
RPGRQ92834 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.23■□□□□ 0.67
RPGRQ92834 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.23■□□□□ 0.67
RPGRQ92834 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RPGRQ92834 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RPGRQ92834 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 AL021578.1-201ENST00000613646 709 ntBASIC19.23■□□□□ 0.67
RPGRQ92834 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.23■□□□□ 0.67
RPGRQ92834 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RPGRQ92834 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RPGRQ92834 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.23■□□□□ 0.67
RPGRQ92834 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RPGRQ92834 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RPGRQ92834 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPGRQ92834 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RPGRQ92834 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RPGRQ92834 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RPGRQ92834 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPGRQ92834 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.22■□□□□ 0.67
RPGRQ92834 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RPGRQ92834 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
RPGRQ92834 TPM3P8-201ENST00000330554 643 ntBASIC19.22■□□□□ 0.67
RPGRQ92834 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.22■□□□□ 0.67
RPGRQ92834 AC092506.1-202ENST00000401022 528 ntBASIC19.22■□□□□ 0.67
RPGRQ92834 AC114812.1-204ENST00000449669 728 ntBASIC19.22■□□□□ 0.67
RPGRQ92834 AC004898.1-201ENST00000451057 766 ntBASIC19.22■□□□□ 0.67
RPGRQ92834 AKR7A2P1-201ENST00000460134 915 ntBASIC19.22■□□□□ 0.67
RPGRQ92834 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.22■□□□□ 0.67
RPGRQ92834 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.22■□□□□ 0.67
RPGRQ92834 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPGRQ92834 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.22■□□□□ 0.67
RPGRQ92834 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.22■□□□□ 0.67
RPGRQ92834 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.22■□□□□ 0.67
RPGRQ92834 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RPGRQ92834 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms