Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 RNU1-129P-201ENST00000384064 167 ntBASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 AK4P3-201ENST00000418260 669 ntBASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 MIR5100-201ENST00000579544 119 ntBASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 U1.21-201ENST00000580816 167 ntBASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 NKAPP1-205ENST00000585790 367 ntBASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.4□□□□□ -0.42
MBD3L1Q8WWY6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.4□□□□□ -0.43
MBD3L1Q8WWY6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 AC018892.3-201ENST00000623986 2499 ntBASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 AC152010.1-201ENST00000415779 2006 ntBASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 AC067750.1-201ENST00000608826 6545 ntBASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 PMS2P4-201ENST00000412466 1052 ntBASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 DRAXINP1-201ENST00000437611 948 ntBASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 AL136038.3-201ENST00000561909 1096 ntBASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MBD3L1Q8WWY6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms