Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AL450472.2-201ENST00000603663 1156 ntBASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AL158211.3-201ENST00000607385 239 ntBASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AL133215.2-201ENST00000609242 977 ntBASIC16.06■□□□□ 0.16
PTCD2Q8WV60 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 SSR4P1-203ENST00000599569 2260 ntBASIC16.06■□□□□ 0.16
PTCD2Q8WV60 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AC105250.1-201ENST00000509378 2057 ntBASIC16.05■□□□□ 0.16
PTCD2Q8WV60 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCD2Q8WV60 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AL390039.1-201ENST00000399148 611 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 TSSK5P-201ENST00000423978 907 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AL353705.2-201ENST00000428243 662 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 MTND6P24-201ENST00000440466 518 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 PHKG1P2-201ENST00000457537 863 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AC027369.6-201ENST00000525520 931 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 MIR4313-201ENST00000580760 101 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 RN7SL828P-201ENST00000607615 303 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AC087821.1-201ENST00000623639 567 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 AC073592.8-201ENST00000624126 511 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 GAPDHP74-202ENST00000632456 782 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms