Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 KRT8P12-202ENST00000472924 1397 ntBASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 AC022144.1-201ENST00000602255 1580 ntBASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 SERBP1P3-201ENST00000459980 809 ntBASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 DBET-201ENST00000630918 3363 ntBASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 RN7SL618P-201ENST00000477850 296 ntBASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMARCC2Q8TAQ2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 FO393414.2-201ENST00000405153 598 ntBASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 AL844908.2-201ENST00000609461 460 ntBASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms