Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLX4Q8IY92 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLX4Q8IY92 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLX4Q8IY92 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 AL596276.2-201ENST00000447525 331 ntBASIC18.77■□□□□ 0.59
SLX4Q8IY92 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLX4Q8IY92 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.77■□□□□ 0.59
SLX4Q8IY92 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLX4Q8IY92 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 HLA-K-203ENST00000430151 1046 ntBASIC18.76■□□□□ 0.59
SLX4Q8IY92 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 AC125604.1-201ENST00000496255 707 ntBASIC18.76■□□□□ 0.59
SLX4Q8IY92 DUX4L47-201ENST00000566374 394 ntBASIC18.76■□□□□ 0.59
SLX4Q8IY92 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 AC090164.2-201ENST00000611487 516 ntBASIC18.76■□□□□ 0.59
SLX4Q8IY92 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.76■□□□□ 0.59
SLX4Q8IY92 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLX4Q8IY92 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 RN7SKP175-201ENST00000408472 289 ntBASIC18.75■□□□□ 0.59
SLX4Q8IY92 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 MIR4750-201ENST00000584564 56 ntBASIC18.75■□□□□ 0.59
SLX4Q8IY92 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 AC055811.4-201ENST00000624039 1754 ntBASIC18.75■□□□□ 0.59
SLX4Q8IY92 AC084364.1-201ENST00000551967 1556 ntBASIC18.75■□□□□ 0.59
SLX4Q8IY92 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.75■□□□□ 0.59
SLX4Q8IY92 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLX4Q8IY92 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 MIR3147-201ENST00000577811 66 ntBASIC18.74■□□□□ 0.59
SLX4Q8IY92 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 FGFR3P1-201ENST00000449999 601 ntBASIC18.74■□□□□ 0.59
SLX4Q8IY92 AL353637.1-201ENST00000451571 732 ntBASIC18.74■□□□□ 0.59
SLX4Q8IY92 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLX4Q8IY92 AC009955.4-201ENST00000597192 544 ntBASIC18.74■□□□□ 0.59
SLX4Q8IY92 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.74■□□□□ 0.59
SLX4Q8IY92 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms