Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.75■□□□□ 0.11
APLFQ8IW19 AC190387.1-201ENST00000551683 408 ntBASIC15.75■□□□□ 0.11
APLFQ8IW19 DUX4L27-201ENST00000554796 1261 ntBASIC15.75■□□□□ 0.11
APLFQ8IW19 AL135744.1-201ENST00000565098 629 ntBASIC15.75■□□□□ 0.11
APLFQ8IW19 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.75■□□□□ 0.11
APLFQ8IW19 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.75■□□□□ 0.11
APLFQ8IW19 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
APLFQ8IW19 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
APLFQ8IW19 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.75■□□□□ 0.11
APLFQ8IW19 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
APLFQ8IW19 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
APLFQ8IW19 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
APLFQ8IW19 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.74■□□□□ 0.11
APLFQ8IW19 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.74■□□□□ 0.11
APLFQ8IW19 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 AC055876.3-201ENST00000431496 288 ntBASIC15.74■□□□□ 0.11
APLFQ8IW19 HLA-J-202ENST00000469281 1241 ntBASIC15.74■□□□□ 0.11
APLFQ8IW19 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.74■□□□□ 0.11
APLFQ8IW19 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.74■□□□□ 0.11
APLFQ8IW19 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.74■□□□□ 0.11
APLFQ8IW19 AC005412.3-201ENST00000580309 715 ntBASIC15.74■□□□□ 0.11
APLFQ8IW19 AC138649.4-201ENST00000612222 287 ntBASIC15.74■□□□□ 0.11
APLFQ8IW19 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.74■□□□□ 0.11
APLFQ8IW19 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
APLFQ8IW19 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
APLFQ8IW19 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.74■□□□□ 0.11
APLFQ8IW19 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 AC005840.4-201ENST00000541242 2494 ntBASIC15.74■□□□□ 0.11
APLFQ8IW19 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.74■□□□□ 0.11
APLFQ8IW19 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 AC005912.2-201ENST00000619492 2400 ntBASIC15.74■□□□□ 0.11
APLFQ8IW19 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.74■□□□□ 0.11
APLFQ8IW19 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APLFQ8IW19 MIR600HG-201ENST00000449175 5984 ntBASIC15.74■□□□□ 0.11
APLFQ8IW19 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.73■□□□□ 0.11
APLFQ8IW19 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 BASP1P1-201ENST00000430708 665 ntBASIC15.73■□□□□ 0.11
APLFQ8IW19 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.73■□□□□ 0.11
APLFQ8IW19 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.73■□□□□ 0.11
APLFQ8IW19 INGX-202ENST00000489074 768 ntBASIC15.73■□□□□ 0.11
APLFQ8IW19 AC093214.1-201ENST00000511688 1107 ntBASIC15.73■□□□□ 0.11
APLFQ8IW19 KRT8P23-201ENST00000560090 1207 ntBASIC15.73■□□□□ 0.11
APLFQ8IW19 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms