Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AC127383.1-201ENST00000444697 1800 ntBASIC14□□□□□ -0.17
LINC00346Q8IVM7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AL627223.1-201ENST00000416693 442 ntBASIC14□□□□□ -0.17
LINC00346Q8IVM7 BX842568.4-201ENST00000421222 227 ntBASIC14□□□□□ -0.17
LINC00346Q8IVM7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 PHKG1P2-201ENST00000457537 863 ntBASIC14□□□□□ -0.17
LINC00346Q8IVM7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AC093520.2-201ENST00000561830 333 ntBASIC14□□□□□ -0.17
LINC00346Q8IVM7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 MIR3687-2-201ENST00000577708 61 ntBASIC14□□□□□ -0.17
LINC00346Q8IVM7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 MIR3687-1-201ENST00000614492 61 ntBASIC14□□□□□ -0.17
LINC00346Q8IVM7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00346Q8IVM7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00346Q8IVM7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC006486.2-201ENST00000624246 2199 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms