Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 RN7SL399P-201ENST00000471648 279 ntBASIC16.73■□□□□ 0.27
RNF135Q8IUD6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.73■□□□□ 0.27
RNF135Q8IUD6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 AC061975.2-201ENST00000581722 295 ntBASIC16.73■□□□□ 0.27
RNF135Q8IUD6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 AC133539.2-201ENST00000604757 467 ntBASIC16.73■□□□□ 0.27
RNF135Q8IUD6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 YBX1P6-201ENST00000442962 1002 ntBASIC16.72■□□□□ 0.27
RNF135Q8IUD6 RPL13AP20-201ENST00000459725 609 ntBASIC16.72■□□□□ 0.27
RNF135Q8IUD6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 AP000812.2-201ENST00000538934 718 ntBASIC16.72■□□□□ 0.27
RNF135Q8IUD6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 AC020765.3-201ENST00000613051 740 ntBASIC16.72■□□□□ 0.27
RNF135Q8IUD6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms