Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFX6Q8HWS3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RFX6Q8HWS3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC211486.1-202ENST00000416371 468 ntBASIC16.44■□□□□ 0.22
RFX6Q8HWS3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC211476.1-201ENST00000503899 468 ntBASIC16.44■□□□□ 0.22
RFX6Q8HWS3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 BANF1P1-201ENST00000553684 263 ntBASIC16.44■□□□□ 0.22
RFX6Q8HWS3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AL109954.1-202ENST00000564051 2148 ntBASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 AC023157.3-201ENST00000619086 2088 ntBASIC16.44■□□□□ 0.22
RFX6Q8HWS3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
RFX6Q8HWS3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 SPDYE14P-201ENST00000442619 822 ntBASIC16.43■□□□□ 0.22
RFX6Q8HWS3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 AC026150.2-201ENST00000564693 1156 ntBASIC16.43■□□□□ 0.22
RFX6Q8HWS3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms