Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL23A1Q86Y22 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.44■□□□□ 0.7
COL23A1Q86Y22 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.44■□□□□ 0.7
COL23A1Q86Y22 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL23A1Q86Y22 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 RPSAP31-201ENST00000416648 895 ntBASIC19.43■□□□□ 0.7
COL23A1Q86Y22 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 IGLV3-15-201ENST00000518356 244 ntBASIC19.43■□□□□ 0.7
COL23A1Q86Y22 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 AC006453.1-201ENST00000636037 1257 ntBASIC19.43■□□□□ 0.7
COL23A1Q86Y22 AC068587.8-201ENST00000641239 219 ntBASIC19.43■□□□□ 0.7
COL23A1Q86Y22 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL23A1Q86Y22 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 KRT8P14-201ENST00000414254 1442 ntBASIC19.42■□□□□ 0.7
COL23A1Q86Y22 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 AC006335.1-201ENST00000445200 547 ntBASIC19.42■□□□□ 0.7
COL23A1Q86Y22 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 RTN3P1-201ENST00000536295 711 ntBASIC19.42■□□□□ 0.7
COL23A1Q86Y22 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 AC087045.2-201ENST00000606279 1003 ntBASIC19.42■□□□□ 0.7
COL23A1Q86Y22 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.42■□□□□ 0.7
COL23A1Q86Y22 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms