Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAPH1Q70E73 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAPH1Q70E73 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAPH1Q70E73 AC105250.1-201ENST00000509378 2057 ntBASIC15.93■□□□□ 0.14
RAPH1Q70E73 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAPH1Q70E73 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AC090616.6-203ENST00000579186 1945 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AC006486.2-201ENST00000624246 2199 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AL590627.1-203ENST00000421194 1026 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AC073389.1-201ENST00000595595 795 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AC099522.2-201ENST00000607001 744 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CICP4-201ENST00000447359 2812 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AC018892.3-201ENST00000623986 2499 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RAPH1Q70E73 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAPH1Q70E73 AC026748.1-201ENST00000624349 3251 ntBASIC15.92■□□□□ 0.14
RAPH1Q70E73 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 AC104581.4-201ENST00000623126 3052 ntBASIC15.91■□□□□ 0.14
RAPH1Q70E73 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.91■□□□□ 0.14
RAPH1Q70E73 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 AC092865.6-201ENST00000642101 219 ntBASIC15.91■□□□□ 0.14
RAPH1Q70E73 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 CICP24-201ENST00000605464 2705 ntBASIC15.91■□□□□ 0.14
RAPH1Q70E73 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RAPH1Q70E73 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAPH1Q70E73 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms