Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 SPDYE7P-202ENST00000420373 878 ntBASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF549Q6P9A3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 AL080243.2-201ENST00000418783 582 ntBASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 TARDBPP1-201ENST00000442013 1203 ntBASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF549Q6P9A3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ZNF549Q6P9A3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
ZNF549Q6P9A3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF549Q6P9A3 RPL37AP1-201ENST00000412502 279 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms