Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 FTLP1-201ENST00000449155 526 ntBASIC19.49■□□□□ 0.71
RC3H1Q5TC82 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC024681.1-201ENST00000521917 487 ntBASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 AC079336.7-201ENST00000623428 1078 ntBASIC19.49■□□□□ 0.71
RC3H1Q5TC82 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RC3H1Q5TC82 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 AC008132.1-202ENST00000342005 1389 ntBASIC19.48■□□□□ 0.71
RC3H1Q5TC82 AGGF1P2-201ENST00000426656 2106 ntBASIC19.48■□□□□ 0.71
RC3H1Q5TC82 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 AC104457.1-201ENST00000401024 814 ntBASIC19.48■□□□□ 0.71
RC3H1Q5TC82 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 Z97180.1-201ENST00000445173 988 ntBASIC19.48■□□□□ 0.71
RC3H1Q5TC82 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 FTLP10-202ENST00000505798 471 ntBASIC19.48■□□□□ 0.71
RC3H1Q5TC82 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 BNIP3P13-201ENST00000599968 566 ntBASIC19.48■□□□□ 0.71
RC3H1Q5TC82 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RC3H1Q5TC82 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms