Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 KRT18P2-201ENST00000447938 1258 ntBASIC14.04□□□□□ -0.16
ODF4Q2M2E3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF4Q2M2E3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 GPX1P2-201ENST00000429271 606 ntBASIC14.03□□□□□ -0.16
ODF4Q2M2E3 AC009078.2-202ENST00000463353 338 ntBASIC14.03□□□□□ -0.16
ODF4Q2M2E3 AC079776.4-201ENST00000511039 504 ntBASIC14.03□□□□□ -0.16
ODF4Q2M2E3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 SLC25A6P4-201ENST00000586535 553 ntBASIC14.03□□□□□ -0.16
ODF4Q2M2E3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.03□□□□□ -0.16
ODF4Q2M2E3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 C18orf15-201ENST00000623680 2534 ntBASIC14.03□□□□□ -0.16
ODF4Q2M2E3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ODF4Q2M2E3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms