Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AC092053.1-201ENST00000605787 1936 ntBASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 PKD1P1-201ENST00000458669 6805 ntBASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CEP164P1-201ENST00000455142 418 ntBASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AC012044.1-201ENST00000603431 297 ntBASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 AC005622.1-201ENST00000636801 1703 ntBASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RSPO4Q2I0M5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 AL031731.1-201ENST00000642131 2094 ntBASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 AC020922.3-201ENST00000595064 547 ntBASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 AC092171.5-201ENST00000608012 942 ntBASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 AL121723.1-201ENST00000445194 1519 ntBASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RSPO4Q2I0M5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AC078991.1-201ENST00000437297 610 ntBASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AC006335.1-201ENST00000445200 547 ntBASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 KRT18P43-201ENST00000469825 1281 ntBASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms