Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40BQ12829 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB40BQ12829 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 AC096734.2-201ENST00000562054 433 ntBASIC14.16□□□□□ -0.14
RAB40BQ12829 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40BQ12829 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40BQ12829 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB40BQ12829 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40BQ12829 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40BQ12829 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 AL365209.1-201ENST00000624418 6473 ntBASIC14.15□□□□□ -0.14
RAB40BQ12829 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40BQ12829 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB40BQ12829 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40BQ12829 RHOQP3-201ENST00000437982 621 ntBASIC14.15□□□□□ -0.14
RAB40BQ12829 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40BQ12829 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40BQ12829 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40BQ12829 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.15□□□□□ -0.14
RAB40BQ12829 AL161645.1-201ENST00000622716 1255 ntBASIC14.15□□□□□ -0.14
RAB40BQ12829 AC007064.4-201ENST00000637740 555 ntBASIC14.15□□□□□ -0.14
RAB40BQ12829 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40BQ12829 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
RAB40BQ12829 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40BQ12829 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
RAB40BQ12829 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.15□□□□□ -0.15
RAB40BQ12829 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RAB40BQ12829 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 AC140479.7-201ENST00000636301 2332 ntBASIC14.14□□□□□ -0.15
RAB40BQ12829 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
RAB40BQ12829 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40BQ12829 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40BQ12829 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RAB40BQ12829 CRYGEP-201ENST00000412192 528 ntBASIC14.14□□□□□ -0.15
RAB40BQ12829 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40BQ12829 AF186996.4-201ENST00000467186 377 ntBASIC14.14□□□□□ -0.15
RAB40BQ12829 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40BQ12829 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40BQ12829 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.14□□□□□ -0.15
RAB40BQ12829 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40BQ12829 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40BQ12829 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40BQ12829 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40BQ12829 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40BQ12829 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB40BQ12829 AC023141.13-201ENST00000604991 943 ntBASIC14.14□□□□□ -0.15
RAB40BQ12829 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40BQ12829 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40BQ12829 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms