Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 AZGP1P1-201ENST00000411909 902 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 AC004461.1-201ENST00000412461 403 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 KRT18P32-201ENST00000424695 1287 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 ALG1L8P-201ENST00000533887 760 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 HNRNPUP1-201ENST00000554987 333 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 AC093520.2-201ENST00000561830 333 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 AC097359.3-201ENST00000603982 1210 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 AL513210.1-201ENST00000629608 234 ntBASIC15.23■□□□□ 0.03
HMGCS1Q01581 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
HMGCS1Q01581 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGCS1Q01581 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 MIR1233-2-201ENST00000408138 82 ntBASIC15.22■□□□□ 0.03
HMGCS1Q01581 MIR1233-1-201ENST00000408722 82 ntBASIC15.22■□□□□ 0.03
HMGCS1Q01581 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 AL627223.1-201ENST00000416693 442 ntBASIC15.22■□□□□ 0.03
HMGCS1Q01581 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 BANF1P1-201ENST00000553684 263 ntBASIC15.22■□□□□ 0.03
HMGCS1Q01581 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMGCS1Q01581 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 TCAF2P1-201ENST00000291129 2421 ntBASIC15.22■□□□□ 0.03
HMGCS1Q01581 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCS1Q01581 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCS1Q01581 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCS1Q01581 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms