Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CX3CL1P78423 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.78□□□□□ -0.36
CX3CL1P78423 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CL1P78423 AC003101.2-201ENST00000612557 442 ntBASIC12.78□□□□□ -0.36
CX3CL1P78423 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CX3CL1P78423 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 AC134407.2-201ENST00000625089 1978 ntBASIC12.78□□□□□ -0.36
CX3CL1P78423 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CX3CL1P78423 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.77□□□□□ -0.36
CX3CL1P78423 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CX3CL1P78423 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.36
CX3CL1P78423 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CX3CL1P78423 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CL1P78423 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CX3CL1P78423 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CX3CL1P78423 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.77□□□□□ -0.37
CX3CL1P78423 SPDYE7P-202ENST00000420373 878 ntBASIC12.77□□□□□ -0.37
CX3CL1P78423 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.77□□□□□ -0.37
CX3CL1P78423 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.77□□□□□ -0.37
CX3CL1P78423 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.77□□□□□ -0.37
CX3CL1P78423 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
CX3CL1P78423 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 AP001160.2-201ENST00000596071 487 ntBASIC12.77□□□□□ -0.37
CX3CL1P78423 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.77□□□□□ -0.37
CX3CL1P78423 AP001059.3-201ENST00000619053 235 ntBASIC12.77□□□□□ -0.37
CX3CL1P78423 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.77□□□□□ -0.37
CX3CL1P78423 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CX3CL1P78423 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.77□□□□□ -0.37
CX3CL1P78423 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 PRAL-201ENST00000624952 3286 ntBASIC12.77□□□□□ -0.37
CX3CL1P78423 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CX3CL1P78423 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CX3CL1P78423 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.77□□□□□ -0.37
CX3CL1P78423 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 AC011477.6-201ENST00000604980 1927 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 AC023157.3-201ENST00000619086 2088 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 AC004987.2-201ENST00000395959 1148 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 HLA-J-203ENST00000494367 1087 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms