Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 AP001160.2-201ENST00000596071 487 ntBASIC13.79□□□□□ -0.2
HIST1H3AP68431 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 AL691403.2-201ENST00000618460 490 ntBASIC13.79□□□□□ -0.2
HIST1H3AP68431 Z92544.3-201ENST00000624747 417 ntBASIC13.79□□□□□ -0.2
HIST1H3AP68431 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 AC023157.3-201ENST00000619086 2088 ntBASIC13.79□□□□□ -0.2
HIST1H3AP68431 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HIST1H3AP68431 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H3AP68431 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 CNN2P2-201ENST00000443536 909 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 CNN2P3-201ENST00000450201 906 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC051619.7-201ENST00000568314 623 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC025048.3-201ENST00000590609 569 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC005702.4-201ENST00000618393 416 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 AL136317.3-201ENST00000618497 906 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 TUBB3P1-201ENST00000405796 1332 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 KRT8P44-201ENST00000441609 1350 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 FO538757.1-201ENST00000623083 1397 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
HIST1H3AP68431 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC007326.2-201ENST00000624224 7579 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 C18orf15-201ENST00000623680 2534 ntBASIC13.78□□□□□ -0.2
HIST1H3AP68431 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H3AP68431 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
HIST1H3AP68431 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HIST1H3AP68431 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HIST1H3AP68431 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HIST1H3AP68431 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H3AP68431 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H3AP68431 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H3AP68431 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H3AP68431 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H3AP68431 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H3AP68431 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H3AP68431 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms