Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ACTA1P68133 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.11□□□□□ -0.15
ACTA1P68133 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ACTA1P68133 AC105233.2-201ENST00000523697 349 ntBASIC14.11□□□□□ -0.15
ACTA1P68133 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.11□□□□□ -0.15
ACTA1P68133 AF228730.5-201ENST00000530288 346 ntBASIC14.11□□□□□ -0.15
ACTA1P68133 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
ACTA1P68133 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.11□□□□□ -0.15
ACTA1P68133 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.11□□□□□ -0.15
ACTA1P68133 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTA1P68133 AL121894.2-201ENST00000602977 491 ntBASIC14.11□□□□□ -0.15
ACTA1P68133 AC104692.2-201ENST00000603054 253 ntBASIC14.11□□□□□ -0.15
ACTA1P68133 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.11□□□□□ -0.15
ACTA1P68133 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.11□□□□□ -0.15
ACTA1P68133 AL773604.1-201ENST00000617417 272 ntBASIC14.11□□□□□ -0.15
ACTA1P68133 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTA1P68133 AC148477.8-201ENST00000624298 468 ntBASIC14.11□□□□□ -0.15
ACTA1P68133 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ACTA1P68133 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ACTA1P68133 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTA1P68133 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.11□□□□□ -0.15
ACTA1P68133 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.11□□□□□ -0.15
ACTA1P68133 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ACTA1P68133 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.11□□□□□ -0.15
ACTA1P68133 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTA1P68133 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ACTA1P68133 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTA1P68133 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ACTA1P68133 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ACTA1P68133 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTA1P68133 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 RPS8P6-201ENST00000426177 609 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ACTA1P68133 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.1□□□□□ -0.15
ACTA1P68133 AC093909.1-201ENST00000504731 1122 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTA1P68133 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTA1P68133 MIR7706-201ENST00000613747 67 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 SPTSSB-204ENST00000617024 1292 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ACTA1P68133 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 AC023024.2-201ENST00000623561 1993 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTA1P68133 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTA1P68133 AC005089.1-201ENST00000619486 2241 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTA1P68133 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ACTA1P68133 AC232323.1-201ENST00000540724 2099 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 REXO1L5P-201ENST00000622260 2098 ntBASIC14.1□□□□□ -0.15
ACTA1P68133 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTA1P68133 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.09□□□□□ -0.15
ACTA1P68133 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.09□□□□□ -0.15
ACTA1P68133 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ACTA1P68133 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.09□□□□□ -0.15
ACTA1P68133 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ACTA1P68133 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTA1P68133 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms