Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
CXCR4P61073 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 AL589702.1-201ENST00000641229 1509 ntBASIC14.41□□□□□ -0.1
CXCR4P61073 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 FAM197Y8-203ENST00000450145 560 ntBASIC14.41□□□□□ -0.1
CXCR4P61073 AL513480.1-201ENST00000451731 511 ntBASIC14.41□□□□□ -0.1
CXCR4P61073 AL031432.2-201ENST00000566714 459 ntBASIC14.41□□□□□ -0.1
CXCR4P61073 AL928711.1-201ENST00000570165 459 ntBASIC14.41□□□□□ -0.1
CXCR4P61073 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.41□□□□□ -0.1
CXCR4P61073 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCR4P61073 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 TP73-AS1-207ENST00000624167 988 ntBASIC14.41□□□□□ -0.1
CXCR4P61073 AL645728.2-201ENST00000641974 660 ntBASIC14.41□□□□□ -0.1
CXCR4P61073 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CXCR4P61073 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CXCR4P61073 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCR4P61073 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCR4P61073 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 RPS2P28-201ENST00000314255 741 ntBASIC14.4□□□□□ -0.1
CXCR4P61073 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCR4P61073 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.4□□□□□ -0.1
CXCR4P61073 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.4□□□□□ -0.1
CXCR4P61073 AC018712.1-201ENST00000455767 687 ntBASIC14.4□□□□□ -0.1
CXCR4P61073 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 MIR4751-201ENST00000578027 74 ntBASIC14.4□□□□□ -0.1
CXCR4P61073 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms