Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA4P54764 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA4P54764 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA4P54764 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA4P54764 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
EPHA4P54764 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA4P54764 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA4P54764 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.15■□□□□ 0.02
EPHA4P54764 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA4P54764 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 BOLA2P3-201ENST00000404566 256 ntBASIC15.15■□□□□ 0.02
EPHA4P54764 AC112492.5-201ENST00000421897 457 ntBASIC15.15■□□□□ 0.02
EPHA4P54764 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA4P54764 ACTG1P3-201ENST00000431775 1114 ntBASIC15.15■□□□□ 0.02
EPHA4P54764 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.15■□□□□ 0.02
EPHA4P54764 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA4P54764 AC120045.2-201ENST00000567334 178 ntBASIC15.15■□□□□ 0.02
EPHA4P54764 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA4P54764 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
EPHA4P54764 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.15■□□□□ 0.02
EPHA4P54764 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA4P54764 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
EPHA4P54764 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA4P54764 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 AC018892.3-201ENST00000623986 2499 ntBASIC15.14■□□□□ 0.01
EPHA4P54764 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 C1QBPP1-201ENST00000400117 770 ntBASIC15.14■□□□□ 0.01
EPHA4P54764 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 TMEM14DP-201ENST00000422205 345 ntBASIC15.14■□□□□ 0.01
EPHA4P54764 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 KRT43P-201ENST00000434019 910 ntBASIC15.14■□□□□ 0.01
EPHA4P54764 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 AC234783.1-201ENST00000441761 496 ntBASIC15.14■□□□□ 0.01
EPHA4P54764 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.14■□□□□ 0.01
EPHA4P54764 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 MIR6805-201ENST00000615055 62 ntBASIC15.14■□□□□ 0.01
EPHA4P54764 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms