Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.43□□□□□ -0.26
NKX2-5P52952 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NKX2-5P52952 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-5P52952 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-5P52952 MIR4758-201ENST00000577688 71 ntBASIC13.43□□□□□ -0.26
NKX2-5P52952 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NKX2-5P52952 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.43□□□□□ -0.26
NKX2-5P52952 AC018529.2-202ENST00000611482 3087 ntBASIC13.43□□□□□ -0.26
NKX2-5P52952 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NKX2-5P52952 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-5P52952 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-5P52952 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-5P52952 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NKX2-5P52952 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-5P52952 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-5P52952 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-5P52952 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-5P52952 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NKX2-5P52952 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-5P52952 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 AC068760.1-201ENST00000493579 1953 ntBASIC13.42□□□□□ -0.26
NKX2-5P52952 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
NKX2-5P52952 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 AP002414.1-201ENST00000391405 1147 ntBASIC13.42□□□□□ -0.26
NKX2-5P52952 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 AC239809.2-201ENST00000415381 517 ntBASIC13.42□□□□□ -0.26
NKX2-5P52952 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.42□□□□□ -0.26
NKX2-5P52952 AC007967.3-201ENST00000434308 558 ntBASIC13.42□□□□□ -0.26
NKX2-5P52952 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.42□□□□□ -0.26
NKX2-5P52952 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 LINC01238-205ENST00000567549 1107 ntBASIC13.42□□□□□ -0.26
NKX2-5P52952 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
NKX2-5P52952 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX2-5P52952 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX2-5P52952 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NKX2-5P52952 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.42□□□□□ -0.26
NKX2-5P52952 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-5P52952 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NKX2-5P52952 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-5P52952 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX2-5P52952 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-5P52952 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms