Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.73■□□□□ 0.43
USP11P51784 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.73■□□□□ 0.43
USP11P51784 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
USP11P51784 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 AC098850.1-201ENST00000419919 790 ntBASIC17.73■□□□□ 0.43
USP11P51784 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.73■□□□□ 0.43
USP11P51784 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.73■□□□□ 0.43
USP11P51784 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 COX20P2-201ENST00000452636 358 ntBASIC17.73■□□□□ 0.43
USP11P51784 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.73■□□□□ 0.43
USP11P51784 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
USP11P51784 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.73■□□□□ 0.43
USP11P51784 BRI3BPP1-201ENST00000594224 787 ntBASIC17.73■□□□□ 0.43
USP11P51784 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 AC009090.5-201ENST00000624886 2285 ntBASIC17.73■□□□□ 0.43
USP11P51784 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
USP11P51784 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP11P51784 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.72■□□□□ 0.43
USP11P51784 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.72■□□□□ 0.43
USP11P51784 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP11P51784 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
USP11P51784 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 AC084364.1-201ENST00000551967 1556 ntBASIC17.72■□□□□ 0.43
USP11P51784 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 AL035633.1-201ENST00000406139 838 ntBASIC17.72■□□□□ 0.43
USP11P51784 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.72■□□□□ 0.43
USP11P51784 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.72■□□□□ 0.43
USP11P51784 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.72■□□□□ 0.43
USP11P51784 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 AC092552.1-201ENST00000547243 906 ntBASIC17.72■□□□□ 0.43
USP11P51784 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.72■□□□□ 0.43
USP11P51784 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.72■□□□□ 0.43
USP11P51784 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP11P51784 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
USP11P51784 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP11P51784 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
USP11P51784 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
USP11P51784 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.71■□□□□ 0.43
USP11P51784 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.71■□□□□ 0.43
USP11P51784 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
USP11P51784 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.71■□□□□ 0.43
USP11P51784 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
USP11P51784 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
USP11P51784 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.71■□□□□ 0.43
USP11P51784 RPL5P21-201ENST00000404620 815 ntBASIC17.71■□□□□ 0.43
USP11P51784 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms