Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PPT1-215ENST00000641471 2368 ntBASIC14.73□□□□□ -0.05
RNF144AP50876 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RNF144AP50876 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 AC254562.1-201ENST00000417586 456 ntBASIC14.73□□□□□ -0.05
RNF144AP50876 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 AP006288.1-201ENST00000446065 395 ntBASIC14.73□□□□□ -0.05
RNF144AP50876 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF144AP50876 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.73□□□□□ -0.05
RNF144AP50876 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF144AP50876 AC243562.2-201ENST00000561247 970 ntBASIC14.73□□□□□ -0.05
RNF144AP50876 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF144AP50876 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RNF144AP50876 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF144AP50876 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF144AP50876 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF144AP50876 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.72□□□□□ -0.05
RNF144AP50876 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.72□□□□□ -0.05
RNF144AP50876 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF144AP50876 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF144AP50876 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
RNF144AP50876 AC105021.1-202ENST00000570572 669 ntBASIC14.72□□□□□ -0.05
RNF144AP50876 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 LINC00628-201ENST00000628516 1289 ntBASIC14.72□□□□□ -0.05
RNF144AP50876 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF144AP50876 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RNF144AP50876 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
RNF144AP50876 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.72□□□□□ -0.05
RNF144AP50876 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF144AP50876 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RNF144AP50876 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
RNF144AP50876 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms