Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX1P48742 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.62■□□□□ 0.25
LHX1P48742 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX1P48742 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX1P48742 ENPP7P5-201ENST00000541031 1031 ntBASIC16.62■□□□□ 0.25
LHX1P48742 AL359711.2-201ENST00000563105 872 ntBASIC16.62■□□□□ 0.25
LHX1P48742 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX1P48742 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX1P48742 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX1P48742 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
LHX1P48742 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX1P48742 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.62■□□□□ 0.25
LHX1P48742 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LHX1P48742 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX1P48742 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX1P48742 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX1P48742 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX1P48742 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.62■□□□□ 0.25
LHX1P48742 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.62■□□□□ 0.25
LHX1P48742 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX1P48742 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX1P48742 KRT8P22-201ENST00000562317 1415 ntBASIC16.62■□□□□ 0.25
LHX1P48742 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.61■□□□□ 0.25
LHX1P48742 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 AC127383.1-201ENST00000444697 1800 ntBASIC16.61■□□□□ 0.25
LHX1P48742 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LHX1P48742 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LHX1P48742 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX1P48742 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 VDAC1P7-201ENST00000462417 847 ntBASIC16.61■□□□□ 0.25
LHX1P48742 RN7SL837P-201ENST00000463010 287 ntBASIC16.61■□□□□ 0.25
LHX1P48742 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LHX1P48742 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX1P48742 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX1P48742 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LHX1P48742 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX1P48742 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX1P48742 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX1P48742 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LHX1P48742 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LHX1P48742 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX1P48742 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX1P48742 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 SOCS2P1-201ENST00000417727 557 ntBASIC16.6■□□□□ 0.25
LHX1P48742 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
LHX1P48742 GIMAP3P-201ENST00000495150 836 ntBASIC16.6■□□□□ 0.25
LHX1P48742 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX1P48742 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.6■□□□□ 0.25
LHX1P48742 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.6■□□□□ 0.25
LHX1P48742 AC120045.2-201ENST00000567334 178 ntBASIC16.6■□□□□ 0.25
LHX1P48742 AC132938.2-201ENST00000579188 680 ntBASIC16.6■□□□□ 0.25
LHX1P48742 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX1P48742 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LHX1P48742 IGHV3-72-202ENST00000621503 303 ntBASIC16.6■□□□□ 0.25
LHX1P48742 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX1P48742 AL591163.1-201ENST00000641757 987 ntBASIC16.6■□□□□ 0.25
LHX1P48742 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX1P48742 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX1P48742 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX1P48742 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LHX1P48742 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX1P48742 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms