Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CSNK1DP48730 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1DP48730 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.71■□□□□ 0.11
CSNK1DP48730 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.71■□□□□ 0.11
CSNK1DP48730 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.71■□□□□ 0.11
CSNK1DP48730 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.71■□□□□ 0.11
CSNK1DP48730 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSNK1DP48730 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSNK1DP48730 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CSNK1DP48730 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.71■□□□□ 0.1
CSNK1DP48730 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.1
CSNK1DP48730 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.71■□□□□ 0.1
CSNK1DP48730 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSNK1DP48730 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.71■□□□□ 0.1
CSNK1DP48730 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CSNK1DP48730 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 INTS4P2-202ENST00000614726 2019 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 AP003680.1-201ENST00000598970 3660 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 VDAC1P7-201ENST00000462417 847 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 RN7SL692P-201ENST00000464677 288 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 ENPP7P5-201ENST00000541031 1031 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 AC120045.2-201ENST00000567334 178 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1DP48730 AC133539.2-201ENST00000604757 467 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 WFDC1-204ENST00000613603 549 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CSNK1DP48730 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.7■□□□□ 0.1
CSNK1DP48730 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1DP48730 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1DP48730 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1DP48730 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1DP48730 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
CSNK1DP48730 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 CU639417.3-201ENST00000624240 1404 ntBASIC15.69■□□□□ 0.1
CSNK1DP48730 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 AC009090.5-201ENST00000624886 2285 ntBASIC15.69■□□□□ 0.1
CSNK1DP48730 TMBIM7P-203ENST00000641617 1718 ntBASIC15.69■□□□□ 0.1
CSNK1DP48730 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSNK1DP48730 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1DP48730 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1DP48730 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.69■□□□□ 0.1
CSNK1DP48730 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1DP48730 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1DP48730 CR383656.12-201ENST00000549567 513 ntBASIC15.69■□□□□ 0.1
CSNK1DP48730 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.69■□□□□ 0.1
CSNK1DP48730 AC005225.4-201ENST00000557330 545 ntBASIC15.69■□□□□ 0.1
CSNK1DP48730 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1DP48730 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.69■□□□□ 0.1
CSNK1DP48730 AC124283.3-201ENST00000570869 594 ntBASIC15.69■□□□□ 0.1
CSNK1DP48730 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms