Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.5□□□□□ -0.73
PCP4P48539 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC10.5□□□□□ -0.73
PCP4P48539 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC10.5□□□□□ -0.73
PCP4P48539 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC10.5□□□□□ -0.73
PCP4P48539 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC10.5□□□□□ -0.73
PCP4P48539 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC10.49□□□□□ -0.73
PCP4P48539 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 AL359547.1-201ENST00000419168 2190 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 NPY2R-201ENST00000329476 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC10.49□□□□□ -0.73
PCP4P48539 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 UGT1A10-201ENST00000344644 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 NEFL-204ENST00000639464 3205 ntTSL 5 BASIC10.49□□□□□ -0.73
PCP4P48539 ITIH1-211ENST00000537050 2493 ntTSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 GAPDHP72-202ENST00000636791 2141 ntTSL 5 BASIC10.49□□□□□ -0.73
PCP4P48539 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 TMEM105-201ENST00000332900 3321 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
PCP4P48539 LILRB1-205ENST00000396331 2960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.49□□□□□ -0.73
PCP4P48539 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PCP4P48539 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC10.49□□□□□ -0.73
PCP4P48539 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 NCAM1-202ENST00000401611 2510 ntTSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 LINC02170-202ENST00000562231 2218 ntTSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 ENPP2-203ENST00000427067 3271 ntTSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
PCP4P48539 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 AC009237.3-201ENST00000393279 1427 ntBASIC10.48□□□□□ -0.73
PCP4P48539 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 CTH-203ENST00000411986 2044 ntTSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms