Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.87□□□□□ -0.03
GABRA4P48169 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
GABRA4P48169 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABRA4P48169 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABRA4P48169 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABRA4P48169 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABRA4P48169 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABRA4P48169 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.86□□□□□ -0.03
GABRA4P48169 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
GABRA4P48169 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
GABRA4P48169 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.86□□□□□ -0.03
GABRA4P48169 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.86□□□□□ -0.03
GABRA4P48169 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.86□□□□□ -0.03
GABRA4P48169 AC106886.1-201ENST00000568660 600 ntBASIC14.86□□□□□ -0.03
GABRA4P48169 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.86□□□□□ -0.03
GABRA4P48169 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.86□□□□□ -0.03
GABRA4P48169 CU634019.7-201ENST00000624153 1185 ntBASIC14.86□□□□□ -0.03
GABRA4P48169 FP236241.2-201ENST00000624906 1185 ntBASIC14.86□□□□□ -0.03
GABRA4P48169 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.86□□□□□ -0.03
GABRA4P48169 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
GABRA4P48169 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.86□□□□□ -0.03
GABRA4P48169 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GABRA4P48169 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
GABRA4P48169 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.85□□□□□ -0.03
GABRA4P48169 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GABRA4P48169 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 GK-202ENST00000378941 458 ntTSL 3 BASIC14.85□□□□□ -0.03
GABRA4P48169 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 C1QBPP1-201ENST00000400117 770 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 ACTG1P3-201ENST00000431775 1114 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.85□□□□□ -0.03
GABRA4P48169 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.85□□□□□ -0.03
GABRA4P48169 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.85□□□□□ -0.03
GABRA4P48169 USP32P1-208ENST00000506594 1164 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 CLUHP6-201ENST00000580789 941 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.85□□□□□ -0.03
GABRA4P48169 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.85□□□□□ -0.03
GABRA4P48169 AC008735.3-201ENST00000596646 500 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 AC107373.2-201ENST00000607735 490 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 AL162274.1-201ENST00000617191 1098 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.85□□□□□ -0.03
GABRA4P48169 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GABRA4P48169 AC127383.1-201ENST00000444697 1800 ntBASIC14.85□□□□□ -0.03
GABRA4P48169 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms