Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
GDNFP39905 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.81□□□□□ -0.2
GDNFP39905 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.81□□□□□ -0.2
GDNFP39905 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
GDNFP39905 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
GDNFP39905 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
GDNFP39905 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GDNFP39905 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.81□□□□□ -0.2
GDNFP39905 VN2R19P-201ENST00000442399 1052 ntBASIC13.81□□□□□ -0.2
GDNFP39905 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.81□□□□□ -0.2
GDNFP39905 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.81□□□□□ -0.2
GDNFP39905 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.81□□□□□ -0.2
GDNFP39905 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.81□□□□□ -0.2
GDNFP39905 Z83851.2-201ENST00000609564 659 ntBASIC13.81□□□□□ -0.2
GDNFP39905 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.81□□□□□ -0.2
GDNFP39905 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.81□□□□□ -0.2
GDNFP39905 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.81□□□□□ -0.2
GDNFP39905 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.81□□□□□ -0.2
GDNFP39905 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.81□□□□□ -0.2
GDNFP39905 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
GDNFP39905 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDNFP39905 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.81□□□□□ -0.2
GDNFP39905 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.81□□□□□ -0.2
GDNFP39905 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.8□□□□□ -0.2
GDNFP39905 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
GDNFP39905 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.8□□□□□ -0.2
GDNFP39905 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.8□□□□□ -0.2
GDNFP39905 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 PRSS29P-201ENST00000440800 595 ntBASIC13.8□□□□□ -0.2
GDNFP39905 FAM185BP-201ENST00000443595 716 ntBASIC13.8□□□□□ -0.2
GDNFP39905 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 AC034105.1-201ENST00000563488 319 ntBASIC13.8□□□□□ -0.2
GDNFP39905 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GDNFP39905 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
GDNFP39905 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
GDNFP39905 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GDNFP39905 AJ011931.1-201ENST00000618749 2492 ntBASIC13.8□□□□□ -0.2
GDNFP39905 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.8□□□□□ -0.2
GDNFP39905 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDNFP39905 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.8□□□□□ -0.2
GDNFP39905 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDNFP39905 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
GDNFP39905 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDNFP39905 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
GDNFP39905 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDNFP39905 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDNFP39905 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms