Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.06□□□□□ -0.32
SNCAP37840 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.06□□□□□ -0.32
SNCAP37840 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 DUSP5P1-201ENST00000441325 1139 ntBASIC13.06□□□□□ -0.32
SNCAP37840 AF186996.4-201ENST00000467186 377 ntBASIC13.06□□□□□ -0.32
SNCAP37840 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.06□□□□□ -0.32
SNCAP37840 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.06□□□□□ -0.32
SNCAP37840 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 AL160237.2-201ENST00000556165 472 ntBASIC13.06□□□□□ -0.32
SNCAP37840 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 MIR4515-201ENST00000584082 81 ntBASIC13.06□□□□□ -0.32
SNCAP37840 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.06□□□□□ -0.32
SNCAP37840 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.06□□□□□ -0.32
SNCAP37840 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
SNCAP37840 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SNCAP37840 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SNCAP37840 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCAP37840 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.06□□□□□ -0.32
SNCAP37840 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
SNCAP37840 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SNCAP37840 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCAP37840 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.05□□□□□ -0.32
SNCAP37840 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.05□□□□□ -0.32
SNCAP37840 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.05□□□□□ -0.32
SNCAP37840 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.05□□□□□ -0.32
SNCAP37840 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.05□□□□□ -0.32
SNCAP37840 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 IFNL4P1-201ENST00000607083 540 ntBASIC13.05□□□□□ -0.32
SNCAP37840 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms