Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.65■□□□□ 0.26
RFC1P35251 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.65■□□□□ 0.26
RFC1P35251 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RFC1P35251 AC025678.2-201ENST00000562061 970 ntBASIC16.65■□□□□ 0.26
RFC1P35251 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 AC093028.1-201ENST00000622998 982 ntBASIC16.65■□□□□ 0.26
RFC1P35251 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC1P35251 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.65■□□□□ 0.26
RFC1P35251 AC022532.1-201ENST00000624563 1728 ntBASIC16.65■□□□□ 0.26
RFC1P35251 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC1P35251 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
RFC1P35251 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RFC1P35251 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RFC1P35251 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 CETN4P-206ENST00000642099 2168 ntBASIC16.64■□□□□ 0.25
RFC1P35251 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RFC1P35251 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 AL080243.2-201ENST00000418783 582 ntBASIC16.64■□□□□ 0.25
RFC1P35251 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.64■□□□□ 0.25
RFC1P35251 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.64■□□□□ 0.25
RFC1P35251 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.64■□□□□ 0.25
RFC1P35251 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.64■□□□□ 0.25
RFC1P35251 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.64■□□□□ 0.25
RFC1P35251 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFC1P35251 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFC1P35251 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.64■□□□□ 0.25
RFC1P35251 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.64■□□□□ 0.25
RFC1P35251 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
RFC1P35251 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.63■□□□□ 0.25
RFC1P35251 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFC1P35251 AC104640.1-201ENST00000562617 2109 ntBASIC16.63■□□□□ 0.25
RFC1P35251 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RFC1P35251 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms