Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL136379.1-201ENST00000623471 2642 ntBASIC16.68■□□□□ 0.26
CHRNA3P32297 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHRNA3P32297 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA3P32297 AC068587.6-202ENST00000641839 5619 ntBASIC16.68■□□□□ 0.26
CHRNA3P32297 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA3P32297 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHRNA3P32297 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHRNA3P32297 TCAF2P1-201ENST00000291129 2421 ntBASIC16.67■□□□□ 0.26
CHRNA3P32297 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA3P32297 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA3P32297 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA3P32297 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA3P32297 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA3P32297 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA3P32297 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA3P32297 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA3P32297 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 C18orf15-201ENST00000623680 2534 ntBASIC16.66■□□□□ 0.26
CHRNA3P32297 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.66■□□□□ 0.26
CHRNA3P32297 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA3P32297 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHRNA3P32297 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA3P32297 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.66■□□□□ 0.26
CHRNA3P32297 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA3P32297 SPDYE7P-202ENST00000420373 878 ntBASIC16.66■□□□□ 0.26
CHRNA3P32297 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHRNA3P32297 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.66■□□□□ 0.26
CHRNA3P32297 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA3P32297 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA3P32297 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA3P32297 TUBB3P1-201ENST00000405796 1332 ntBASIC16.66■□□□□ 0.26
CHRNA3P32297 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA3P32297 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA3P32297 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA3P32297 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA3P32297 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms