Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CAPN3P20807 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPN3P20807 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.24■□□□□ 0.03
CAPN3P20807 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CAPN3P20807 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN3P20807 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPN3P20807 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CAPN3P20807 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN3P20807 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CAPN3P20807 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 AC026748.1-201ENST00000624349 3251 ntBASIC15.24■□□□□ 0.03
CAPN3P20807 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CAPN3P20807 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CAPN3P20807 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.24■□□□□ 0.03
CAPN3P20807 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN3P20807 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN3P20807 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CAPN3P20807 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
CAPN3P20807 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CAPN3P20807 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN3P20807 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN3P20807 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN3P20807 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN3P20807 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 AC025678.2-201ENST00000562061 970 ntBASIC15.23■□□□□ 0.03
CAPN3P20807 AC138761.1-201ENST00000584393 385 ntBASIC15.23■□□□□ 0.03
CAPN3P20807 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN3P20807 AC023141.13-201ENST00000604991 943 ntBASIC15.23■□□□□ 0.03
CAPN3P20807 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.23■□□□□ 0.03
CAPN3P20807 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 AC092865.6-201ENST00000642101 219 ntBASIC15.23■□□□□ 0.03
CAPN3P20807 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 REXO1L1P-202ENST00000608646 1974 ntBASIC15.23■□□□□ 0.03
CAPN3P20807 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN3P20807 AL691432.1-201ENST00000596308 1422 ntBASIC15.23■□□□□ 0.03
CAPN3P20807 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN3P20807 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CAPN3P20807 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CAPN3P20807 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CAPN3P20807 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN3P20807 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 AC013726.1-201ENST00000563747 2285 ntBASIC15.22■□□□□ 0.03
CAPN3P20807 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPN3P20807 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CAPN3P20807 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.22■□□□□ 0.03
CAPN3P20807 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CAPN3P20807 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CAPN3P20807 AC243562.2-201ENST00000561247 970 ntBASIC15.22■□□□□ 0.03
CAPN3P20807 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPN3P20807 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.22■□□□□ 0.03
CAPN3P20807 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.22■□□□□ 0.03
CAPN3P20807 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPN3P20807 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPN3P20807 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 230.4 ms