Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PNMA6AP0CW24 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNMA6AP0CW24 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
PNMA6AP0CW24 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNMA6AP0CW24 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNMA6AP0CW24 AL136982.4-201ENST00000437689 1740 ntBASIC17.3■□□□□ 0.36
PNMA6AP0CW24 AC041040.2-201ENST00000622926 2899 ntBASIC17.3■□□□□ 0.36
PNMA6AP0CW24 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNMA6AP0CW24 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 MIR346-201ENST00000362234 95 ntBASIC17.29■□□□□ 0.36
PNMA6AP0CW24 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 FAM86C2P-203ENST00000528684 1004 ntBASIC17.29■□□□□ 0.36
PNMA6AP0CW24 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 MTDHP5-201ENST00000598980 586 ntBASIC17.29■□□□□ 0.36
PNMA6AP0CW24 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 UXT-AS1-201ENST00000590504 1525 ntBASIC17.29■□□□□ 0.36
PNMA6AP0CW24 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 ELL2P1-201ENST00000413990 1906 ntBASIC17.29■□□□□ 0.36
PNMA6AP0CW24 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.29■□□□□ 0.36
PNMA6AP0CW24 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AC009090.5-201ENST00000624886 2285 ntBASIC17.28■□□□□ 0.36
PNMA6AP0CW24 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AL390755.1-201ENST00000623716 2027 ntBASIC17.28■□□□□ 0.36
PNMA6AP0CW24 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 CEND1P1-201ENST00000451006 455 ntBASIC17.28■□□□□ 0.36
PNMA6AP0CW24 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 MIR4469-201ENST00000583919 79 ntBASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AC010327.4-202ENST00000591484 748 ntBASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AC022145.2-201ENST00000598203 171 ntBASIC17.28■□□□□ 0.36
PNMA6AP0CW24 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PNMA6AP0CW24 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms