Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPNS1P04632 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.71■□□□□ 0.11
CAPNS1P04632 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPNS1P04632 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPNS1P04632 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.71■□□□□ 0.11
CAPNS1P04632 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 ELK1P1-201ENST00000485699 580 ntBASIC15.71■□□□□ 0.11
CAPNS1P04632 SPDYE18-201ENST00000510091 1050 ntBASIC15.71■□□□□ 0.11
CAPNS1P04632 AC103810.3-201ENST00000583567 96 ntBASIC15.71■□□□□ 0.11
CAPNS1P04632 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPNS1P04632 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CAPNS1P04632 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CAPNS1P04632 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CAPNS1P04632 AC138035.3-201ENST00000622706 2791 ntBASIC15.71■□□□□ 0.11
CAPNS1P04632 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPNS1P04632 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
CAPNS1P04632 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CAPNS1P04632 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CAPNS1P04632 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CAPNS1P04632 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CAPNS1P04632 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.71■□□□□ 0.1
CAPNS1P04632 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.71■□□□□ 0.1
CAPNS1P04632 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.71■□□□□ 0.1
CAPNS1P04632 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 SSR4P1-203ENST00000599569 2260 ntBASIC15.7■□□□□ 0.1
CAPNS1P04632 SLC22A20-204ENST00000530038 1673 ntBASIC15.7■□□□□ 0.1
CAPNS1P04632 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPNS1P04632 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 AC006277.1-201ENST00000624348 1610 ntBASIC15.7■□□□□ 0.1
CAPNS1P04632 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CAPNS1P04632 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPNS1P04632 CROCCP4-201ENST00000457096 498 ntBASIC15.7■□□□□ 0.1
CAPNS1P04632 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CAPNS1P04632 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPNS1P04632 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.7■□□□□ 0.1
CAPNS1P04632 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPNS1P04632 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPNS1P04632 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.7■□□□□ 0.1
CAPNS1P04632 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 AC069224.1-201ENST00000566372 1715 ntBASIC15.7■□□□□ 0.1
CAPNS1P04632 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 AL009178.2-201ENST00000597278 2719 ntBASIC15.7■□□□□ 0.1
CAPNS1P04632 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPNS1P04632 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPNS1P04632 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPNS1P04632 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CAPNS1P04632 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms