Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
TRGV3P03979 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.46□□□□□ -0.41
TRGV3P03979 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.46□□□□□ -0.41
TRGV3P03979 SPDYE17-201ENST00000412399 783 ntBASIC12.46□□□□□ -0.41
TRGV3P03979 RPL37AP1-201ENST00000412502 279 ntBASIC12.46□□□□□ -0.41
TRGV3P03979 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.46□□□□□ -0.41
TRGV3P03979 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.46□□□□□ -0.41
TRGV3P03979 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
TRGV3P03979 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.46□□□□□ -0.41
TRGV3P03979 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.46□□□□□ -0.41
TRGV3P03979 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRGV3P03979 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.46□□□□□ -0.41
TRGV3P03979 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV3P03979 AL390754.1-201ENST00000619088 582 ntBASIC12.46□□□□□ -0.41
TRGV3P03979 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TRGV3P03979 AC068418.2-201ENST00000577309 3703 ntBASIC12.46□□□□□ -0.41
TRGV3P03979 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.46□□□□□ -0.42
TRGV3P03979 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
TRGV3P03979 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TRGV3P03979 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV3P03979 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV3P03979 AL365203.3-201ENST00000609742 2057 ntBASIC12.46□□□□□ -0.42
TRGV3P03979 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TRGV3P03979 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
TRGV3P03979 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
TRGV3P03979 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TRGV3P03979 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TRGV3P03979 FO393414.2-201ENST00000405153 598 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 AL080243.2-201ENST00000418783 582 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 AL512638.1-201ENST00000457493 794 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 PHKG1P2-201ENST00000457537 863 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 CYMP-203ENST00000474680 1263 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 RN7SL618P-201ENST00000477850 296 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.45□□□□□ -0.42
TRGV3P03979 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.45□□□□□ -0.42
TRGV3P03979 AC097493.3-201ENST00000509725 367 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.45□□□□□ -0.42
TRGV3P03979 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.45□□□□□ -0.42
TRGV3P03979 AC027796.2-201ENST00000575326 344 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 TEX28P1-201ENST00000613479 1221 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 TEX28P2-201ENST00000617764 1221 ntBASIC12.45□□□□□ -0.42
TRGV3P03979 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.45□□□□□ -0.42
TRGV3P03979 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms