Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.08□□□□□ -0.16
CNOT4O95628 MRPS18AP1-201ENST00000414458 589 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 HIST3H2BA-201ENST00000436555 524 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 AC114501.2-201ENST00000439631 535 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 RN7SL692P-201ENST00000464677 288 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 MEIS3P1-201ENST00000495167 958 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.08□□□□□ -0.16
CNOT4O95628 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CNOT4O95628 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.08□□□□□ -0.16
CNOT4O95628 AL596325.1-201ENST00000563991 1082 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.08□□□□□ -0.16
CNOT4O95628 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 SPDYE22P-201ENST00000582158 798 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.08□□□□□ -0.16
CNOT4O95628 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.08□□□□□ -0.16
CNOT4O95628 AC074044.1-201ENST00000609673 707 ntBASIC14.08□□□□□ -0.16
CNOT4O95628 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.08□□□□□ -0.16
CNOT4O95628 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
CNOT4O95628 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CNOT4O95628 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.08□□□□□ -0.16
CNOT4O95628 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CNOT4O95628 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CNOT4O95628 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CNOT4O95628 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CNOT4O95628 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CNOT4O95628 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.08□□□□□ -0.16
CNOT4O95628 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CNOT4O95628 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.07□□□□□ -0.16
CNOT4O95628 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 AL596087.1-201ENST00000400979 1969 ntBASIC14.07□□□□□ -0.16
CNOT4O95628 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CNOT4O95628 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CNOT4O95628 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.07□□□□□ -0.16
CNOT4O95628 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
CNOT4O95628 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.07□□□□□ -0.16
CNOT4O95628 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.07□□□□□ -0.16
CNOT4O95628 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.07□□□□□ -0.16
CNOT4O95628 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CNOT4O95628 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.07□□□□□ -0.16
CNOT4O95628 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.07□□□□□ -0.16
CNOT4O95628 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
CNOT4O95628 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CNOT4O95628 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 Z97205.2-201ENST00000564697 1639 ntBASIC14.07□□□□□ -0.16
CNOT4O95628 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.07□□□□□ -0.16
CNOT4O95628 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CNOT4O95628 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CNOT4O95628 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.07□□□□□ -0.16
CNOT4O95628 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CNOT4O95628 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CNOT4O95628 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CNOT4O95628 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms